{"id":7632,"date":"2025-04-07T15:54:37","date_gmt":"2025-04-07T13:54:37","guid":{"rendered":"https:\/\/biochemie.uni-goettingen.de\/?page_id=7632"},"modified":"2025-08-20T15:14:49","modified_gmt":"2025-08-20T13:14:49","slug":"publications-oberbeckmann","status":"publish","type":"page","link":"https:\/\/biochemie.uni-goettingen.de\/index.php\/publications-oberbeckmann\/","title":{"rendered":"Publications Oberbeckmann"},"content":{"rendered":"

<\/h3>\n

Publications<\/h3>\n

2025<\/b>
\nWelp LM, Wulf A, Chernev A, Horokhovskyi Y, Moshkovskii S, Dybkov O, Neumann P, Pa\u0161en M, Siraj A, Raabe M, G\u00f6thert H, Walshe JL, Infante DA, de A P Schwarzer AC, Dickmanns A, Johannsson S, Schmitzov\u00e1 J, Wohlgemuth I, Netz E, He Y, Fritzemeier K, Delanghe B, Viner R, Vos SM, Oberbeckmann E, Bohnsack KE, Bohnsack MT, Cramer P, Ficner R, Kohlbacher O, Liepe J, Sachsenberg T, Urlaub H. (2025) Chemical crosslinking extends and complements UV crosslinking in analysis of RNA\/DNA nucleic acid-protein interaction sites by mass spectrometry. Nucleic Acids Res.<\/b> 2025 Aug 11;53(15):gkaf727<\/a><\/p>\n

2024<\/strong>
\nResolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT. <\/a>
\nEngeholm M, Roske JJ, Oberbeckmann E, Dienemann C, Lidschreiber M, Cramer P, Farnung L. Mol Cell.<\/strong> 2024 Sep 19;84(18):3423-3437.e8. doi: 10.1016\/j.molcel.2024.08.022. Epub 2024 Sep 12. PMID: 39270644<\/p>\n

Three-step mechanism of promoter escape by RNA polymerase II. <\/a>
\nZhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P. Mol Cell.<\/strong> 2024 May 2;84(9):1699-1710.e6. doi: 10.1016\/j.molcel.2024.03.016. Epub 2024 Apr 10. PMID: 38604172<\/p>\n

Genome organization across scales: mechanistic insights from in vitro reconstitution studies. <\/a>
\nOberbeckmann E, Oudelaar AM. Biochem Soc Trans.<\/strong> 2024 Apr 24;52(2):793-802. doi: 10.1042\/BST20230883. PMID: 38451192<\/p>\n

In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. <\/a>
\nOberbeckmann E, Quililan K, Cramer P, Oudelaar AM. Nat Genet.<\/strong> 2024 Mar;56(3):483-492. doi: 10.1038\/s41588-023-01649-8. Epub 2024 Jan 30. PMID: 38291333<\/p>\n

A single fiber view of the nucleosome organization in eukaryotic chromatin. <\/a>
\nBoltengagen M, Verhagen D, Wolff MR, Oberbeckmann E, Hanke M, Gerland U, Korber P, Mueller-Planitz F. Nucleic Acids Res.<\/strong> 2024 Jan 11;52(1):166-185. doi: 10.1093\/nar\/gkad1098. PMID: 37994698<\/p>\n

2023<\/strong>
\nORE-Seq: Genome-Wide Absolute Occupancy Measurement by Restriction Enzyme Accessibilities. <\/a>
\nOberbeckmann E, Wolff MR, Krietenstein N, Heron M, Schmid A, Straub T, Gerland U, Korber P. Methods Mol Biol.<\/strong> 2023;2611:121-152. doi: 10.1007\/978-1-0716-2899-7_9. PMID: 36807068<\/p>\n

2021<\/strong>
\nGenome information processing by the INO80 chromatin remodeler positions nucleosomes. <\/a>
\nOberbeckmann E, Krietenstein N, Niebauer V, Wang Y, Schall K, Moldt M, Straub T, Rohs R, Hopfner KP, Korber P, Eustermann S. Nat Commun.<\/strong> 2021 May 28;12(1):3231. doi: 10.1038\/s41467-021-23016-z. PMID: 34050142<\/p>\n

Ruler elements in chromatin remodelers set nucleosome array spacing and phasing. <\/a>
\nOberbeckmann E, Niebauer V, Watanabe S, Farnung L, Moldt M, Schmid A, Cramer P, Peterson CL, Eustermann S, Hopfner KP, Korber P. Nat Commun.<\/strong> 2021 May 28;12(1):3232. doi: 10.1038\/s41467-021-23015-0. PMID: 34050140<\/p>\n

2019<\/strong>
\nAbsolute nucleosome occupancy map for the Saccharomyces cerevisiae genome. <\/a>
\nOberbeckmann E, Wolff M, Krietenstein N, Heron M, Ellins JL, Schmid A, Krebs S, Blum H, Gerland U, Korber P. Genome Res.<\/strong> 2019 Dec;29(12):1996-2009. doi: 10.1101\/gr.253419.119. Epub 2019 Nov 6. PMID: 31694866<\/p>\n

2018<\/strong>
\nThe nuclear actin-containing Arp8 module is a linker DNA sensor driving INO80 chromatin remodeling. <\/a>
\nKnoll KR, Eustermann S, Niebauer V, Oberbeckmann E, Stoehr G, Schall K, Tosi A, Schwarz M, Buchfellner A, Korber P, Hopfner KP. Nat Struct Mol Biol.<\/strong> 2018 Sep;25(9):823-832. doi: 10.1038\/s41594-018-0115-8. Epub 2018 Sep 3. PMID: 30177756<\/p>\n<\/div><\/div><\/div><\/div><\/div><\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":10,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"folder":[168],"class_list":["post-7632","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/pages\/7632","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/users\/10"}],"replies":[{"embeddable":true,"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/comments?post=7632"}],"version-history":[{"count":6,"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/pages\/7632\/revisions"}],"predecessor-version":[{"id":8166,"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/pages\/7632\/revisions\/8166"}],"wp:attachment":[{"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/media?parent=7632"}],"wp:term":[{"taxonomy":"folder","embeddable":true,"href":"https:\/\/biochemie.uni-goettingen.de\/index.php\/wp-json\/wp\/v2\/folder?post=7632"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}